Publications

Min, B. et al. (2017) FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.. Bioinformatics. 10.1093/bioinformatics/btx353

Mujic, A. B. et al. (2017) Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus. G3: Genes, Genomes, Genetics. 10.1534/g3.117.039396

Haitjema, C. H. et al. (2017) A parts list for fungal cellulosomes revealed by comparative genomics. Nature Microbiology. 10.1038/nmicrobiol.2017.87

Mondo, S. et al. (2017) Widespread adenine N6-methylation of active genes in fungi. Nature Genetics. 10.1038/ng.3859

Xiong, Y. et al. (2017) A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism. PLOS Genetics. 10.1371/journal.pgen.1006737

Peng, M. et al. (2017) The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi. Journal of Biotechnology. 10.1016/j.jbiotec.2017.02.012

de Vries, R. P. et al. (2017) Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biology. 10.1186/s13059-017-1151-0

Daly, P. et al. (2017) Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments. Biotechnology for Biofuels and Bioproducts. 10.1186/s13068-017-0700-9

Doré, J. et al. (2017) The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation. Environmental Microbiology. 10.1111/1462-2920.13670

Uehling, J. et al. (2017) Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens. Environmental Microbiology. 10.1111/1462-2920.13669

Jiménez, D. J. et al. (2017) Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates. Microbiology Resource Announcements. 10.1128/genomea.01476-16

Wu, W. et al. (2017) Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels. Applied Microbiology and Biotechnology. 10.1007/s00253-017-8091-1