Publications

Kandemir, H. et al. (2026) CAZome comparison in relation to host plant for selected Sordariomycete and Dothidiomycete plant pathogenic fungi. Frontiers in Fungal Biology. 10.3389/ffunb.2026.1789997

Steindorff, A. S. et al. (2026) Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture. Nature Microbiology. 10.1038/s41564-026-02260-3

Ramos, V. M. G. et al. (2026) The Zn(II)2Cys6 transcription factor DsAce3 is a major activator of cellulases in the white-rot fungus Dichomitus squalens. Applied and Environmental Microbiology. 10.1128/aem.01548-25

Drula, E. et al. (2026) Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass. Bioresource Technology. 10.1016/j.biortech.2026.133990

Martin, F. et al. (2026) Draft Genomes of Geographically Distinct Strains and Progeny of the Ectomycorrhizal Basidiomycete Laccaria bicolor.. Journal of Genomics. 10.7150/jgen.130158

Dauphin, B. et al. (2026) Chromosome-scale Genome Assembly of the Most Abundant Ectomycorrhizal Fungus Cenococcum Geophilum Reveals Massive TE Expansion and RIP Defense Mechanism. Genome Biology and Evolution. 10.1093/gbe/evag017

Meagher, M. et al. (2026) Investigating overflow metabolism in heterotrophic cultures of the green alga Chromochloris zofingiensis. Metabolic Engineering. 10.1016/j.ymben.2026.01.007

Ahrendt, S. et al. (2026) Comparative mitogenomics of kingdom Fungi – evolutionary insights and metagenomic applications. Nucleic Acids Research. 10.1093/nar/gkaf1419

Sari, E. et al. (2026) Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi. Proceedings of the National Academy of Sciences of the United States of America. 10.1073/pnas.2519152123

Liu, Z. et al. (2025) Identification and Classification of Fungal GPCR Gene Families. Journal of Fungi. 10.3390/jof12010030

Peng, M. et al. (2025) Multi‐Omics Analyses Reveal Divergent Molecular Mechanisms Underlying Plant Biomass Conversion by Five Fungi. MicrobiologyOpen. 10.1002/mbo3.70201

Olofsson, M. et al. (2025) Dynamic reworking of marine diatom endometabolomes in response to temperature and a model bacterium. mSystems. 10.1128/msystems.01036-25