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Protocols
Find protocols provided by JGI and the JGI user community below … molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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How to Submit Sequencing Samples
… . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and … of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment to … the blue “reports” button on the right side. The Project Overview report includes project-level metadata such as the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … group, a team that develops data science tools, and a user science group. … The JGI has developed a suite of … developed by the Joint BioEnergy Institute for managing information about biological parts, capable of recording …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP … the JGI Investigators interested in translating genomic information to biological function Details Proposals must be …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix …
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Project Management Office
… a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users … on any approved proposal – including the submission of samples for sequencing, or the submission of sequencing data …
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User Advisory Committees
… in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input and … by the JGI Director to provide a scientific and technical overview of the JGI. The SAC serves as the Institute's key … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key external …
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … are notified that their proposal has been accepted, the PMO will assist with initiation of work through: … of Work (project roadmap) Users must prepare Materials (Samples) for Submission before they can receive an emailed …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the … species are carefully selected by the community to evenly sample the diversity of the plant kingdom and allow … germplasm (sequenced mutants and natural accessions) and protocols (transformation, crossing, mutagenesis) are …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and … or metabolomics should apply to one of the JGI’s  calls for user proposals . … The JGI is inviting researchers using the … For more information, contact Tanja Woyke, Deputy for User Programs . … Biological and Environmental Research Support …
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DNA Synthesis Science User Advisory Committee
The DNA Synthesis Science User Advisory Committee is chartered … on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external …
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Prokaryote Program User Advisory Committee
… and strategic objectives of the microbial and metagenome programs and report back to them. The Committee is chartered … not perform management functions nor does it direct the Programs’ management teams on how to operate and manage the Programs. …
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