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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … target is based on 98% of the total available hours.   FY 2015 DOE Metrics There were 958 unique* JGI users in FY2015 … for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress developing …
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How to Submit Sequencing Samples
… includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality … information is included. Please retain your carrier’s tracking information. JGI Shipping Checklist International …
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Natural Prodcast Episode 5: Brad Moore
… enjoyed what he was doing so I wanted to be part of that discovery, and that magic that he was showing, and in his … And the list pretty much goes on. We’re looking at, now, diatoms and golden algae, and, so, really trying to … has been a lot of fun for us in recent years. Started in 2015, when two things happened. One, a new graduate student …
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Microbiome Data Science Team
… is creating new opportunities for breakthrough discoveries and catalyzing a major transition of biology into … and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … springs.  Nature Commun. 7:10476 Varghese NJ,  et al. (2015) Microbial species delineation using whole genome …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and … available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of … Microbiology. 18 (8), 2326-2342 Schulz and Horn (2015) Intranuclear bacteria: inside the cellular control …
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Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
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The diatom Fragilariopsis cylindrus: A model alga to understand cold‐adapted life
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Publication Policy
DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of … of the paper. Auspice Statements Including appropriate tracking numbers is critical to facilitating the tracking of … U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.” … All publications using JGI data produced …
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Mission
Laura.Selbmann©PNRA. All the sampling activities in Antarctica have been performed in the frame of italian … critical minerals and materials. Understand the assembly, function, and the behavior of microbiomes and … and accelerating biosystem-design to spur scientific discovery. Projects focused on organisms for comparative …
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Natural Prodcast Episode 17: Cassandra Quave
… a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and now COVID. We also … the convention went– since the protocol went into force in 2014. There’s now a website that has a lot of resources that … can place a pre-order for the paperback (available June 2022). You might also enjoy Foodie Pharmacology – a science …
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Natural Prodcast Episode 15: Katherine Duncan
I want to talk about ActinoBase, we want to talk about Antarctica, and we want to talk about molecular networking, … things, coalescing them, so that we can really make discoveries. And so I’m really excited to have read that review … The cool thing about genomes is you can, well, if your assembly is good, you can see everything, right? You can see …
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Natural Prodcast Episode 1: The Primer, Part 1
I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise … the bark of the yew tree, is where it was originally discovered. And so that sounds great. There’s a natural source, … could get a precursor of it from the needles and then do a “semi-synthesis”. So, you take a natural precursor, and make …
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