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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley …
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Publication Policy
Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome … Computing Center (NERSC) ( https://ror.org/05v3mvq14 ), which are DOE Office of Science User Facilities …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that … nearby. And of those once we did the predictions, about 140 unique cyclic peptides. And from that, about 130 of them … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …
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Fungal & Algal Program
… or pathogens) and as the most efficient degraders of plant biomass. These abilities are crucial for sustainable plant biomass production as well as converting biomass into bioenergy and bioproducts. The program’s fungal …
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Partnerships: Myco-Ed
Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics …
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Natural Prodcast Episode 23: Aaron Puri
… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a readout of activity. And I … nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix …
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Natural Prodcast Episode 18: A CSP Primer
… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So …
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Mission
… scientific approaches to these challenges.     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All … strains, or enzymes to convert plant biomass components into fuels, chemicals, and bioproducts, …
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Frequently Asked Questions: Project Management
… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal …
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Special Initiatives & Programs
… to develop valuable byproducts from lignin left over after biomass processing. Great Lakes Bioenergy Research Center , … refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Microbiome Data Science Team
… global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human …
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