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… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … favorite topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me … In this episode, Dan and Alison discuss the basics of genome mining, as we get ready to talk to some of the …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … NIGEL MOUNCEY: We fought a lot of patents, we have a lot of trade secrets.  DAN: So then, what brought you here to JGI?  …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, … NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … things become airborne, and they’re going to go with the trade winds. They’re going to get moved around the US. I …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex … reconstruction of complete or near-complete population genomes directly from the environment. These advances have …

… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , …

… In honor of the JGI's 25th anniversary in 2022, we have … help solve energy and environmental challenges. Maximizing soybean yield is critical to energy independence in the U.S. … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has …

… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … and our collaborations to sequence that collection, mine genomes, and develop new technology to access natural …

… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … and murder, in the search for a monopoly on the trade of those plants. So there’s a lot of bloody, dirty … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …