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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected …

… brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … detailing the quantity & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation … or directly via a web interface prior to shipping samples to the JGI. PI sends Project Manager (PM) a list of …

… of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic … are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay …

ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and also as a …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics …

… come, though, too when you start talking about going after single gene clusters. BRIAN BACHMANN: That’s right. JACKIE … mammalian systems. But it allows us to assay on a single cell level against cell lines and against primary cells … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …

Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the … at Arizona State University, which contains representative samples of the spatial, temporal, taxonomic (environmental, …