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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to …

… of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

… to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … for Biotechnology . We are located in the Integrative Genomics Building in the heart of the Berkeley Lab campus, … plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and sustainable …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and also as a …