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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … that can be converted to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular … and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … to explore sequence-function relationships, advancing the discovery of new biosensors for biofuels and bioproducts. …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … and he’s doing some amazing research in and around drug discovery, which includes screening methods, genome mining …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), …
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Microbiome Data Science Team
… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological …
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