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The Metagenome Program uses advanced sequencing technologies to … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes … effort aimed to develop standards, processes, and infrastructure for an integrated microbiome data ecosystem. … …

When submitting sequences to the JGI DNA Synthesis program, please include …

So he could see really into this– so he could look into the structure, really seeing that. And I’m always just looking … pathways and what’s happening there. And he really saw this structure and how that would make the compound faster or … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …

… to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A …

So, I’ve always known Roger as an expert in natural product structure elucidation, but more recently, he’s been leading … Atlas , or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within … resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates genome and metagenome datasets provided by IMG users with a …

… into the lab, it was already basically there. We were just seeking out the last few pieces and trying to understand the … a community effort of putting together the natural product structures that are known. I forget how many structures are … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

Scientist Program is for faculty-level scientists who are seeking to build upon their line of scientific inquiry by …

… a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … there. So, check out the show notes, and I’ll put up some structures and link to some resources you can use to get … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, …