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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley …
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Plant-Microbial Interactions Group
… a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled … fungal expression patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that … thioesterases, we were actually able to find approximately 300 with NRPSs nearby. And of those once we did the … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …
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Partnerships: Myco-Ed
… 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations All MycoEd … Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics …
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Natural Prodcast Episode 18: A CSP Primer
… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So …
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Frequently Asked Questions: Project Management
… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at … has discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range, but at … the Proceedings of the National Academy of Sciences (PNAS). Switchgrass, Panicum virgatum , is a widespread, perennial …
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Publication Policy
… following the guidelines below.  … If you use data from 3 or fewer JGI proposals, include those DOIs in the auspice … Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, …
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Natural Prodcast Episode 23: Aaron Puri
… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a readout of activity. And I … like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix …
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … scientists to think about, because if you look at the 36 hotspots, or terrestrial biodiversity hotspots that we …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… that will help solve energy and environmental challenges. Switchgrass is a native, shrubby grass that can grow … biofuels . For its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought …
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