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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …
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Natural Prodcast Episode 18: A CSP Primer
… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high …
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Frequently Asked Questions: Project Management
… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … be accessed via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … you go to the website, which is smc.jgi.doe.gov , the stats page is showing me that right now we have just over a … of Utah , about her secondary metabolism research on novel microbes and bioactive compounds in the Great Salt Lake. …
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … and take soil and discover a new important drug from the microbes in that soil, there are now international …
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Natural Prodcast Episode 23: Aaron Puri
… bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … ecology community to be able to better predict how their microbes are interacting with each other from sequence …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to …
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Publication Policy
Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Metabolomics Program
… processes, development of high performance plants and microbes, and understanding microbiome interactions. The  … insights into how small molecules function within plants, microbes, and ecosystems. Identifying and analyzing primary … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect … Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction …
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Natural Prodcast Episode 15: Katherine Duncan
… what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …
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