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Institutional User Agreements
… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by … work performed in its User Facilities, is a legally binding contract.   All User researchers must have their …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to …
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Sequencing Submission Requirements for DNA Synthesis
… Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank … source desktop application written by M. Wayne Davis or commercial options include SnapGene . …
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DNA Synthesis Program
… biology, the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and international scientists to … for bioenergy and bioproduct applications. The program has completed over 70 projects, including gene synthesis, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or …
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How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … each step in the process. If you have any questions, please contact your Project Manager or … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly …
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Who We Are
… located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the … Our location at the IGB fosters team science and collaboration with partner organizations such as the DOE … Biology Knowledgebase and the National Microbiome Data Collective.    …
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against …
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Industry Engagement Program
… the JGI serves more than 2,500 users that predominately come from the public sector: academic and government … — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting National … Industry Partners access to our vast set of resources:  JGI sequencing technologies include scaling technologies and …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours …     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on … in FY2025 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … really the same kind of thing. Before the age of genome sequencing, we had to basically break up the pieces of DNA … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …
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