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… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new …

… Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to … Embargo : A period in which data is not publicly available in JGI systems or outside …

… offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and … the development of tools and infrastructure for microbiome data science, and the development of new informatics tools …

… Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI …

… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, tools like artificial intelligence can … priorities:  The JGI is involved in efforts to integrate data in support of new research questions that span domains. …

… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value … microbial functions in situ. This methodology builds on the framework of Hungate and colleagues, to quantify heavy … genomes and other genomic elements (Vyshenska et al. 2023). …

… target is based on 98% of the total available hours.   FY 2023 DOE Metrics There were 2,373 unique* JGI users in FY2023 , which includes Principal Investigators (PIs), Co-PIs, … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …

… to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using public datasets.  … distribution of prokaryotic microbial genome and microbiome datasets. It includes JGI-sequenced and publicly available …

… interactions occurring in microbiomes, these omics data must be complemented with single-cell resolution assays … phage proteins user-friendly integrated pipelines (MVP) and databases (IMG/VR) for viromics analyses … Coclet, C., Sorensen, P.O., Karaoz, U. et al. (2023) Virus diversity and activity is driven by snowmelt and …

… eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … to extract insights from large-scale biological datasets: Our group develops and applies artificial … learning approaches to analyze large-scale biological datasets. This work helps uncover patterns and relationships …

… understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind … health. By integrating cutting-edge technologies and data-driven methods, the program equips researchers … DOE mission-oriented research and contributing validated datasets to further gene function research. The  Open Green …

… ensure U.S. energy dominance by integrating supercomputers, datasets and AI agents to solve key national challenges. The … high-value partnerships among members that catalyze data flows and promote novel data applications. As a large-scale data generator, the JGI …