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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, … energy into chemical energy — and its implications for carbon sequestration, renewable energy and agricultural …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic … and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the …
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Natural Prodcast Episode 17: Cassandra Quave
… of Arts and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental … in the library now. It’s unique in that it is highly targeted towards, again, plants that are used in traditional … this. If you think about the classic OK, find and grind technique where you have your crude extract, you have …
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Plant Program User Advisory Committee
The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …
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Metabolomics Program
… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass spectrometry techniques and computational tools, the program supports … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …
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Natural Prodcast Episode 20: Brian Bachmann
… this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he is the PI … heterologous expression. You can do homologous expression techniques and stimulation techniques and that kind of … We can also genetically manipulate them. We can do strain improvements. We can do all sorts of things. So that’s just …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. The … was also supported by the Laboratory of Excellence ARBRE (ANR- 11-LABX-0002-01), the Region Lorraine, the …
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Natural Prodcast Episode 2: The Primer, Part 2
… and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … Frankia . And so the Frankia are bacteria that live in the root nodules of plants. And these guys were sequenced, and … But… DAN: Yeah, there are a lot of ways to put together carbon molecules. Chemistry is pretty limitless. All right, so …
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Partnerships Development Team
… atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … Anuvia Plant Nutrients is partnering with the JGI to help drive … LanzaTech, a Skokie, Illinois-based company that recycles carbon emissions to make fuels and chemicals, improving air …
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Products
… contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … these projects. Assembly, annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and Algal Resequencing SNP and short indel calls, …
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Single Cell Research Group
… of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate … … Jean-Marie Volland: Assistant Professor, UC Santa Barbara Esther Singer: Director of Product and Market … Science 344, 909-13 (2014). Rinke C., Schwientek P., Sczyrba A., Ivanova N.N., Anderson I.J., Cheng J.F., Darling A., …
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Natural Prodcast Episode 11: Marnix Medema
… a developer. So that has been also a journey of continuous improvement. Dan Udwary: What’s the development process … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are protecting the plants against pathogens. So …
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