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… Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to … Embargo : A period in which data is not publicly available in JGI systems or outside …

… offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from … institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank enables predictive ecosystem biology. The … the development of tools and infrastructure for microbiome data science, and the development of new informatics tools …

… topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me make a … itself medicine, but the coding within the DNA codes for proteins that do the chemistry that put molecules together … now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new …

… and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … to extract insights from large-scale biological datasets: Our group develops and applies artificial …

… Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI …

… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, tools like artificial intelligence can … priorities:  The JGI is involved in efforts to integrate data in support of new research questions that span domains. …

… ensure U.S. energy dominance by integrating supercomputers, datasets and AI agents to solve key national challenges. The … high-value partnerships among members that catalyze data flows and promote novel data applications. As a … repositories for genome information with analysis tools for mining and prediction The JGI works in partnership with …

… be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked about the … center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade … with sequence similarity, either we just looked at which protein domains are in a gene cluster or we did sequence …

… users with various outputs free of charge, including data such as fully annotated genome assemblies or … that the resulting work will be published. JGI data is subject to a brief embargo period, after which it … regulatory requirements. The user is responsible for determining which regulations or permit requirements are …

… in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … of cases, we still have to go through publications to get proteins, and their functions, and all that stuff. And …

… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value … all IMG metagenomes, capturing sequence diversity for proteins of interest. … rapid processing and analysis of large amounts of genomic data. In particular we focus on the integration and …