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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer of marine …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … peptides”. And, you know, we don’t need to get too deep into the chemistry but let’s talk about that compound …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … focusing on how environmental stress and microbial communities affect plant growth and productivity. These …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental … quantitative analysis strategy for stable isotope probing metagenomics . mSystems , …
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