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Metagenome Program
… associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in … flow. One of the key goals of the Program is to develop a deeper understanding of microbial community assembly and … Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and influence microbial dynamics, evolution, and …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the …
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Plant Program
… natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … evolution. It also utilizes advanced tools, including deep learning algorithms for gene annotation and protein …
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IMG Group
… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Community Science Program
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Micro-Scale Applications Group
Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … ALISON: Marcy, is that something that your lab is exploring?  MARCY: Mm-hmm, so this gets back to Dan’s … your approach to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … also suggest that lytic viruses are more common in deep biosphere microbial communities than had been thought. …
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI …
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