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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation …

… has developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and … strides in generating genome sequences for members of the microbial world through bulk community sequencing … the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps researchers develop technology that can then be …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … it has also become possible to identify speciation events within existing species. Within the JGI’s production … Integrated Microbial Genomes (IMG) system serves as a community resource for analysis and annotation of genome and …

The Community Science Program (CSP) provides the scientific community at large with access to high-throughput … assemblies, gene annotations, and analyses available to the community at large. In most cases where the JGI provides …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … clades. We leverage  genome-resolved metagenomics and targeted gene searches to expand representation of … inquires to Simon Roux, who is the Viral Genomics Lead within the program.  … Resources and Tools …

… a description of the product and deliverables as well as target cycle times from sample receipt to completion of … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … Used for the identification of active groups of organisms within a community. Individual samples are fractionated …

… help better-connect industry to JGI resources, as well as target academic, governmental and non-governmental … three primary routes:  … The CSP provides the scientific community at large with access to high-throughput sequencing … visit the Intellectual Property Office  here . … The Community Science Program … Strategic Partnership Projects … …

JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, in the journal Nature . … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … sediments (coastal here defined  by NOAA as the area within 185 km/100 nautical miles of land), and the …

… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … beneficial then to have secondary metabolism in proximity within the genome so that things can transfer.  Plants are a … do it in a way that makes sense. And I always call this the needle in the Haystack. Because if we have 10,000 features …

So I built a lab to do that. And then yes, we had several targets– mechanistic enzymology targets and biosynthetic … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … that the field starts to merge with the synthetic biology community, with the metabolic engineering community because …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better …