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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) … hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a … to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … from a single investment will be reused for further science.  Notice Effective July 27, 2026, the JGI will move …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and … challenges in resource resilience and economic growth. The DOE, through its BER program, plays a central role in …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI … the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to … Deputy of Science Programs …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … first undergo technical review by JGI staff, while the DOE ensures that they meet DOE mission relevance .  During …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … our collaborations and capabilities to enable great science that will help solve energy and environmental …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …
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