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… DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once …

… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … For general questions, please reach out to Christa Pennacchio, Project Management …

… The CSP Functional Genomics call is to enable users to perform … genomic information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics … may be submitted to the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, …

… .  While applications will be accepted that address any aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that are listed in the call and … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   … target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding … Genomics group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics … communities, however they can only provide a signal aggregated at the population level. To fully characterize …

… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …

… Our research focuses on the assembly of metagenomic sequence data into microbial … incorporation of isotopes from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active … metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a …

… See below for a list of Frequently Asked Questions about our proposal submission process. You … instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, go to the … The CSP and FICUS calls are open to both domestic and …

… important biotechnological applications (e.g., new CRISPR-Cas variants and new CRISPR-Cas types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes … resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from …

… also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …