Search

… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … experimental and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms … and attempts to evaluate ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within …

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once … notes. Anyone, anywhere is eligible! Nationality doesn’t matter. Generally established academics or teams of them are …

… (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … host-virus interactions, the exploration of the functional dark matter as well as the development of novel methods to …

The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote genomes and mobile … of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

The CSP Functional Genomics call is to enable users to perform …

… is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-7 (2013). Hess M., Sczyrba A., Egan …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2018 Total 200,000 225,299 112.6% 8,584 8,688 101.2% Q1 2018 …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … shared with permission from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for …

… binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …

… genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of … function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach S et al.  …