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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy …
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Natural Prodcast Episode 18: A CSP Primer
… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … scale is pretty unique in that we don’t just sequence one microbe for you, we sequenced thousands for you or thousands … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating …
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CSP Large Scale Call
… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic … contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … Sai Prahabkar (UC Merced Intern) … Plant / Bacteria / Viral Interactions … Single-cell characterization of …
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Examples: Successful LOIs & Submissions
Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …
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Natural Prodcast Episode 16: Marcy Balunas
Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As much as we … to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …
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Natural Prodcast Episode 4: Nancy Keller
… conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace … use natural products necessarily. Fungi are large. They’re microbes, but they’re large microbes. And they have all …
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Microbial Program
… techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … terrestrial biogeochemical cycling and inter-organismal interactions, which are critical for advancing sustainable …
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DOE Metrics
… target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on …
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