Search

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … that’s what we want to generate. Just to have the largest impact in the broader research community really. MENAKA …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create …

… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required … work will NOT be considered under this program. Plant pathogens will only be considered if they are of …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …

The CSP Functional Genomics call is to enable users to perform …

… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … … JGI Policy & Agreements Analyst Neil Byers, JGI Science Impact Analyst Jeremy Greeter, Berkeley Lab IPO Tech …

… use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … the coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … (low nitrogen or low phosphorus), and how cell identity impacts this response. We will eventually construct a …

… hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … new CRISPR-Cas types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from …