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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … Sample QC Protocol JGI’s Total RNA Sample QC Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … any water that washed down off the hills might carry small pieces of gold along with them and end up in the beds … then I would take a couple of the domains, which are small pieces of the sequence of a polyketide synthase. Each …

… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at … led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. … More genome copies in switchgrass leads to increased climate flexibility …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding … metabolomics with genomic data to gain insights into how small molecules function within plants, microbes, and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …