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… data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … will accelerate gene discovery. BrachyPan on Phytozome (see Brachypodium Resources below) PennyPan on Phytozome …

… they can modulate host metabolism, gene expression and phenotype. We have recently identified resident bacteriophages … rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … in detail, so if you’d like a link, just check out the show notes above or at naturalprodcast.com. I should also mention … grow and have different perspectives– from the chemists on one side, microbiologists, and evolutionary biologists more …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … what genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, … from the GEM catalog (in green) and previously existing reference genomes (in gray). Around the phylogenetic tree, …

… genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … of Plant Biology … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual evolution characterizes …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Crashing. Maybe it’s what I’m used to thinking of, like someone crashing at someone else’s place. OK. That helps me. Dan … similarity to a gene cluster with a known compound from the reference database: It must be identical. It must be that …

The Metagenome Program uses advanced sequencing technologies to … such as carbon cycling, nutrient cycling, and energy flow. One of the key goals of the Program is to develop a deeper … as a community resource for comparative analysis and annotation of all publicly available genomes from three …

… of biodiversity, of which natural products chemistry is one. DAN: So, I’ve always known Roger as an expert in … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … at  npatlas.org , and we’ll have links to it in the show notes at  naturalprodcast.com . DAN: I also just want to say …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … pathway, and I’ll have to do a whole show on it one of these days. If you listen to the Nancy Keller … are made up of chains of amino acids. “Peptide” is just another word for a small protein. And it turns out that a lot …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great … delivery mechanism. So, the polymer structure has specific preferences to cancer cell lines. So, that was introduced in …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … me in mentally welcoming Natural Prodcast’s new co-host, another old friend of mine, Professor Jaclyn Winter , or …

… data for further microbial research and applications. One key program goal is focused on establishing data driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal …