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… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create …

… Plants are complex organisms that harbor a fantastic … contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … and computational genomics to better understand the plant-associated terrestrial world. Research Team    …

… The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

… the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et …

… Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … to gain insights into how small molecules function within plants, microbes, and ecosystems. Identifying and analyzing …

… Uncovering associations between plant roots and fungi that can help or harm plant host … Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other … can enable studies of plant root microbiome and other microbiomes by providing reference genomes of the key …

… generated from mining genomic data by designing and assembling physical DNA constructs that can then be …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … written a book about her life and her science, called The Plant Hunter , and I have to say it’s so awesome! For those … the convention went– since the protocol went into force in 2014. There’s now a website that has a lot of resources that …

… the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls below … may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar metabolomics samples, and should … located in geographically distinct areas and use different plants both for laboratory research and for improving …

… of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential … Integrated Microbial Genomes and Microbiomes …