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… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada …

… model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered genes that are critical for this process. The Impact In the absence of the … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as …

… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is …

… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …

… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …

… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …

… research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative …

… manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …

… Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal …

… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the … the Lab. “This project represents part of our long term efforts to contribute towards a diverse workforce and …

… to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … structure into a cell-free system. The work complements efforts to further develop sustainable alternative approaches … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …