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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… has brought invaluable insights, thoughts, and explorations that has led to groundbreaking science and opportunities to … one. It’s proven to be a really good model for us that we try and continually replicate.”  On the other side, … “life changing” for the interns and loved the opportunities that the program provides. He mentioned working with …
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Gut Fungi: Unexpected Source of Novel Chemicals
… anaerobic fungi can’t harness it, scientists long held that these fungi don’t have the energy to make complex … anaerobic fungal species has revealed, for the first time, that this group is unexpectedly powerful: they can whip up … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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The More the Merrier: Making the Case for Plant Pan-genomes
… short life cycles and can be easily transformed, traits that make them easy to work with bioinformatically and in … larger than any individual genome highlighting the fact that the genetic information in a single reference genome is … pan-genomic context so we don’t overestimate the evolution that happened after polyploidization,” said John Vogel, head …
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Scaling Up Existing Skill Sets
… to gain experience in a non-academic research environment that is also distinct from private industry. I really liked … rewarding challenges. Also, my work touched on phenomena that were outside of the area of focus of most of the rest … JGI summer internship opened the door for me in the sense that I learned many different tools in bioinformatics …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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JGI Welcomes New UEC Members
… providing input and advice on JGI policies and practices that affect users and their access to technical capabilities …
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Tracking the Origins of Methane-Producing Microbes
… report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic … and the finding lends credence to the idea that the hydrogenotrophic pathway predates the Euryarchaeota … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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Supercharging SIP in the Fungal Hyphosphere
… which limits the size and complexity of research studies that use SIP. Researchers at Lawrence Livermore National … fractions. It also limits the potential for human error that might compromise samples. In addition, high-throughput …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository Letter of Support ahead of filing a … doesn’t have enough samples or the type of samples that I need? A: Make a request through the NEON assignable … well? A:  Currently NEON doesn’t have a method for hosting that data. NEON recommends you host your data elsewhere. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… from the School of Natural Sciences and started a program that offered a handful of graduate students summer research … workforce and our diverse collaborators around the world. That said, we recognize that workforce in genomics, including JGI, is not …
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Introducing New Members of the JGI User Executive Committee
… his interest in giving a voice to JGI users who feel that certain data sharing policies fail to represent the … “Large sections of the community are either unaware that [public but use-restricted] exist on [the JGI data … analyzed use-restricted data without contacting the lab that generated that data,” he said in his candidate …
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Kjiersten Fagnan
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