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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI … peer-reviewed basis to the worldwide scientific community can advance your research goals. Keynotes: M. …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students … of fungal gene annotations available to the global research community.  KBase has developed their own educational … to utilize program resources. MICROnet is  built around a community of instructors training students in microbiome …
Learn more
FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) … After an LOI is accepted, the researcher then submits a proposal … Shining a Light: Advanced Photon Source Capabilities for FICUS …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and … The Impact This study illustrates how the research community brings together the data resources enabled by the … each genome. The final dataset – available to the research community on an online interactive browser – contains the …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework provided by these high quality reference genome sequences could help researchers better understand related …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a … are in low abundances—and their functional roles in their community. This study shows how the function-driven, …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … receiving excellent feedback from the general research community. It can be  downloaded through NERSC . …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint … Lab), as part of Hallam’s approved proposal through the Community Science Program . The proposal focuses on …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated reference … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … to contribute towards a diverse workforce and scientific community (working with the JGI) as well as our efforts in …
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