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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … applied to DNA methylation analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & … protocol involves PCR amplification of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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Toward More Efficient Artificial Photosynthesis
… Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that … through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and reviews submissions … (MaxSynBio), the European Research Council grant (ERC 637675 ‘SYBORG’), as well as the US Department of Energy …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint …
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Soil virus offers insight into maintaining microorganisms
… to another, which can have a significant impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, … work was performed on a project award ( https://doi.org/10.46936/cpcy.proj.2021.60161/60000437 ) under the FICUS program …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National Laboratory … (already known as CRISPR) that came up in her team’s metagenomic  samples . While Banfield continued exploring the … more about Doudna and her latest work at the  Innovative Genomics Institute , or find her lab on Twitter  @Doudna_Lab …
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Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes ▿
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Metagenome-assembled genomes reveal unique metabolic adaptations of a basal marine Thaumarchaeota lineage
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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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