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JGI-UC Merced Interns Share Their 2021 Experiences
… 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development enrichment … activities. For some students in the 2021 cohort, this was their first internship experience, while others …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the … (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with … Research (BER) program. In service of solutions that will impact society, the 2024 strategic plan introduces …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials including … a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down the wide array of …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert … providing input and advice on JGI policies and practices that affect users and their access to technical capabilities …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein , PtrbHLH011, within poplar … This work was supported by the U.S. Department of Energy, Office of …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with … offers a first glimpse into a full season’s cycle of this polar environment. This cycle suggests a reliance on photosynthesis to maintain nutrient cycling that evolved separately from other similar systems, and …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … communities in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal … This research was supported in part by the Allen Distinguished …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …
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