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Development of an orthogonal fatty acid biosynthesis system in E. coli for oleochemical production
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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User Executive Committee Charter
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review …
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Eelgrass Proves to Be Much Younger Than We Thought
… The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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Engineering Escherichia coli for Biodiesel Production Utilizing a Bacterial Fatty Acid Methyltransferase
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego … and Viola Willemsen. "Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …
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