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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her … et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing … being assembled. These resources would provide the research community with the ability to address questions such as …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated reference …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … to contribute towards a diverse workforce and scientific community (working with the JGI) as well as our efforts in …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the … user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient … to environments found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. … (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …
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