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Virophages are small viruses with double-stranded DNA genomes that … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …

Data from marine heatwave event may foreshadow climate change … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint … Lab), as part of Hallam’s approved proposal through the Community Science Program . The proposal focuses on …

Researchers at the JGI develop a tool to quickly and accurately … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … receiving excellent feedback from the general research community. It can be  downloaded through NERSC . … The U.S. …

Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her … et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique …

Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing … being assembled. These resources would provide the research community with the ability to address questions such as …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of …

Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated reference …

For many scientists, the culmination of their work into a written … the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …

Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the … user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s …

… 2023 marked a decade since the inception of the flagship internship program … to contribute towards a diverse workforce and scientific community (working with the JGI) as well as our efforts in …