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A More Intuitive Phytozome Interface
… Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … all versions of Phytozome), can always be access in one of two ways: From the BioMart Genome Archive data warehouse.  … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the … interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk …
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Microbiome Data Science Team
… al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns
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Metabolic profiling of two white-rot fungi during 4-hydroxybenzoate conversion reveals biotechnologically relevant biosynthetic pathways
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A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.
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Project Management Office
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JGI on the 2020 Highly Cited Researchers List
… that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … from samples provided by more than 200 scientists and sequenced by the JGI through the  Community Science Program, … they  conducted a large-scale comparison of 135 fungal sequenced genomes to understand how plants and fungi …
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Single Cell Research Group
… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., Lambie S. C., Cookson A. L., …
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JGIota: The Algae Nicknamed ‘Chlamy’
… UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Mike Sneddon
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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