Search

… access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …

… of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA … bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …

Every year, the JGI sequences around 35,000 samples — from plants, algae, …

… candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference … a multi-year study his student conducted involving fungal rust pathogen resistance. Just as the common gardens have …

National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led … Eurasia. The team also identified a gene associated with leaf angle, which determines how much sunlight leaves can …

UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …

… to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … in themselves. For example, a few organisms originally sequenced in the Hungate1000 collection harbor enzymes that … rumen microbes are awesome and this is just another example why.” …