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Fungal diversity and function in metagenomes sequenced from extreme environments
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The Power of One, Amplified
… by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large …
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2025 NeLLi Symposium
… discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a continuation of the previous … define, quantify, and functionally characterize microbial diversity. The Symposium will also focus on experimental … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Microbial species delineation using whole genome sequences
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Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil
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Wetland Sediments Host Diverse Microbial Taxa Capable of Cycling Alcohols
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Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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