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Partnerships Development Team
… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to … genome engineering (CRAGE), which offers single-step genomic integration and prototyping of complex pathways. The …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, …
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A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Lawrence Berkeley National Laboratory … The Deputy of Genomic Technologies serves as the JGI’s primary point of … Program Defining the vast landscape of gene regulatory sequences in the human genome. Understanding how variation …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they … user facility. The staff and resources shifted to offering genomic science capabilities for energy and environmental …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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JGI@25: Fueling Investigation into Methane-Making Microbes
… to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … were able to provide colleagues at the Salk Institute with genomic DNA samples from Ruminococcus flavefaciens … rumen microbes are awesome and this is just another example why.” …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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