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How to Target a Microbial Needle within a Community Haystack
… complex environmental samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … microbes within metagenome samples and associate their sequences with their roles within their environments. …
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JGIota: Looking Back at Sequencing for Soybeans
So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s strengths – …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing containers … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …
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JGI Portals
… and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … The work wraps more than a decade of working with researchers at the U.S. Department of Energy (DOE) Joint …
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DNA Synthesis Program
… energy and environmental challenges. Through innovative research in synthetic biology, the program enables the design … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a …
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John Vogel
… genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … et. al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant …
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Examples: Successful LOIs & Submissions
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JGIota: The Algae Nicknamed ‘Chlamy’
UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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NeLLi — Symposium on New Lineages of Life
Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel … cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further … of these new lineages will provide new cornerstones for research in the areas of bioenergy and biomedicine, as well as …
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Eelgrass Proves to Be Much Younger Than We Thought
… adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature Plants , was … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly …
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