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A functional microbiome catalogue crowdsourced from North American rivers
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics … mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn about … synthetic biology review process .  … Proposers are encouraged to review the JGI’s sample requirements . Samples …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … to the chemicals that make species unique and different from one another. They are incredibly important to medicine, … as an important line of communication to the scientific community. Host Dan Udwary talks to luminaries in the field …
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How to Target a Microbial Needle within a Community Haystack
… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. … Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and Benjamin …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, … Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for … proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our …
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JGI@25: Using Team Science to Build Communities Around Data
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… a close as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has … Officer). “You define the word ‘collegial’” “Every user facility at this Laboratory needs to have a great … in his event remarks. “I feel that is something crucial to our success, and Ray has been that. That person needs …
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Massie S. Ballon
… content on social media. She is also involved in the JGI’s community outreach efforts. Ms. Ballon has a degree in molecular biology & biochemistry from Wesleyan University, and a graduate certificate in … JGI’s strategic vision, the Institute’s staff and user community. … LBNL Biosciences Area Organizational …
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The Expanding Universe of Methane Metabolisms in Archaea
… atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular …
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In-depth Spatiotemporal Characterization of Planktonic Archaeal and Bacterial Communities in North and South San Francisco Bay
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