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Triggering Morel Fruiting
… assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the … China, and a wild black morel strain M. importuna CCBAS932 from the forests of France, were sequenced and annotated … woods above forest soils. This is important to decrease CO2 emissions from decaying leaves and woods into the …
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Natural Prodcast Episode 4: Nancy Keller
… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Marine Microbe Contains Multitudes
… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … Lab), through the JGI Community Science Program . The metagenomes were also processed using the JGI-developed …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Natural Prodcast Episode 7: Ben Shen
… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So … enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a …
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Building Sphagnum Genomic Resources
… matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … and the University of Vienna  reported recovering draft metagenome-assembled genomes for seven novel species of … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … bind quickly and efficiently in the genome by adding tagged transcription factors to a genomic DNA library. “It’s … FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes anymore, but their functional …
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Products
Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of … on our website. The approved proposals start October 1, 2022. See the full list of awardees below: …
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