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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into … these microbes in the future. Join Sarah Bagby (Case Western Reserve University) and Simon Roux (JGI) as they …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … to learn more about the program's areas of focus, major initiatives and more.  …
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User Support Analysis Group
… for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … The JGI is inviting researchers using the U.S. Culture Collection Network … The JGI performs sequencing, metabolomics and synthesis on behalf of the U.S. …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic … the third episode of Natural Prodcast, and the third and final part of our Primer conversation, where we’ve introduced …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … the resources for free. 8.  Q: What makes a successful project? A: Combination of: DOE mission relevance Science …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … possible given the finite staff available to the Phytozome project. What will happen to Phytozome v12 URLs after August …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … trichocarpa ) is the fastest growing hardwood tree in the western United States, making it an energy feedstock of … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … from University of California (UC), San Diego and Scripps Institution of Oceanography (SIO). You can find the podcast …
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