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Natural Prodcast Episode 3: The Primer, Part 3
… who all have really interesting stories and very cool research. I hope you’ll stick around. But, for now, here’s … in this field. Anybody who works in some kind of biological research has the opportunity to, you know, use that research towards secondary metabolism aims. And we need new …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … author in the Microbiome Data Science group led by Nikos Kyrpides. To demonstrate its utility, Nayfach applied CheckV …
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Game On: High School Students Drive Everglades Metagenomics Study
… is in this soil? Jonathan had been reaching out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got turned … science and wanted to pay it forward. Defining a Diverse Research Topic After a video conference interview between …
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Natural Prodcast Episode 1: The Primer, Part 1
Program, which I was hired into, and my job is to do cool research, and also to talk to the wider natural products … be fun to have the conversation. So I am Dan Udwary. I’m a researcher in the Secondary Metabolites Science Program here … natural product biosynthetic gene clusters and to do research to get a better understanding of that data. ALISON: …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… that will help shape all of our futures.” Proposing a Research Experience Benskin wanted to give his high school juniors a research project experience and one of his email inquiries, … samples from multiple locations. Back in the classroom, JGI researchers walked students through the processes of DNA …
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JGI Advisory Committees Code of Conduct
… support our continuing contributions to advancing the research ecosystem. Their trust hinges on sustaining our …
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JGI@25: From Life at the Extremes to Editing Genomes
… with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & …
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2022 Progress Report
… seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … leading integrative genome science user facility enabling researchers to solve the world’s evolving energy and …   Mission  The mission of the JGI is to provide the global research community with access to the most advanced …
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Axel Visel
Institutes of Health, American Heart Association, Medical Research Council (UK),  Nature, Cell , Nature Genetics , Nature Methods ,  Genome Research (Editorial Board) , Cell Reports, Nature Structural … Tripp HJ, Rinke C, Pati A, Huntemann M, Visel A , Woyke T, Kyrpides NC, Rubin EM (2014).  Stop codon reassignments in …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed datasets from … database to include a dedicated section for viruses, so researchers around the world would have better, easier … than the previous one . To identify so many genomes, JGI researcher Antonio Camargo developed a new pipeline for …
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JGI Portals
… and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access …
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Tanja Woyke
Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete … and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from …
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