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A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Tanja Woyke
… After studying the mechanism of action of antifungal natural … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … but we knew the families,” Kyrpides said. Yet, “almost 20 years of metagenomic data and metagenomic analysis, and … Pavlopoulos said. “Consequently, we have amassed an extensive repository of groundbreaking insights, significantly …
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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Giant viruses with an expanded complement of translation system components
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can … cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Germany. The BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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