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Expression and regulatory asymmetry of retained Arabidopsis thaliana transcription factor genes derived from whole genome duplication
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Whole genome sequence, CAZyme repertoire and sugar metabolic model of the phytopathogenic fungus Kretzschmaria zonata GFP 132
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CoverM: Read alignment statistics for metagenomics.
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably … and now disseminated around the globe, often as a rootstock for  Citrus , appeals in other ways. It better tolerates …
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Jeremy Schmutz
… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms … 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis enables discovery of …
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Streamlining the Design-to-Build Transition with Build-Optimization Software Tools
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A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … in their neighborhoods and nearby forests with the right tools to track infection. The parallel development of the …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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