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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Strain Engineering
The focus of this group, in recent years, has been to bring … to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an … additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally integrated into a …
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … to revive the art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in …
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JGI@25: The Little Alga That Could
… a Genome Insider podcast minisode.) Since the JGI’s early sequencing of C. reinhardtii became available, data mined by … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … green algal genomes using Chlamy as a reference for functional annotation, including Chromochloris zofingiensis …
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Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation
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PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon
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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular‐mycorrhizal symbiosis in Brachypodium distachyon
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon
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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … of the Integrative Genomics Building—the new home of the JGI and KBase in the heart of the Lab’s 200-acre campus—with … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut … Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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