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… recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data Collaborative. This award recognizes distinguished …
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… analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this group … metagenome binning software … Education … Selected Publications … Software …
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Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … Microbiology, Microbiome ; NSF Division Of Biological Infrastructure Program; NSF Postdoctoral Fellowship Program; … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …
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… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the October …
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… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … public repository of BGC sequences that come pre-annotated using multiple commonly used sequence analysis tools is a … and secondary metabolites information from isolate and metagenome data. The SMC ( smc.jgi.doe.gov ) is designed …
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Miscanthus sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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