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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … in Nature and Medicine.” It’s obviously focused more on the bacterial side of the field, and it’s a little hard to find … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Fungal Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some …
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Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from …
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Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes
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Genome sequence of the Leisingera aquimarina type strain (DSM 24565T), a member of the marine Roseobacter clade rich in extrachromosomal elements
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Learning to Look
Machine learning approach significantly expands inovirus … As their small genomes can be easily manipulated through genetic engineering, inoviruses are used for several … phages to help the bacterial host resist foreign genetic elements. In some cases, Roux and his colleagues found that …
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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