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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications The planet’s microbial diversity is immense, yet much of it remains … data will also soon be contained within the JGI’s Secondary Metabolism Collaboratory (SMC) portal ( smc.jgi.lbl.gov ). … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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A dynamic microbial sulfur cycle in a serpentinizing continental ophiolite
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Biogeochemical Cycling by a Low-Diversity Microbial Community in Deep Groundwater
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Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
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Game On: High School Students Drive Everglades Metagenomics Study
… partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched … much is unknown about the taxonomic diversity and methane metabolism within the Florida Everglades. They decided to … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Graduate Students Get Thesis Research Opportunity at the JGI
… students the opportunity to pursue part of their thesis research at one of the DOE national laboratories or … to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in … anthropogenic impacts on wetland microbiome composition and metabolism, work on which she will expand with her study of …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … transforming, and respiring carbon. Understanding the metabolisms that SAR324 and other microbes use could inform …
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A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved … the University of Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has progressed, …
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Light-powered CO2 fixation in a chloroplast mimic with natural and synthetic parts
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Microbial methane production from calcium carbonate at moderately alkaline pH
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